Here is a list of all class members with links to the classes they belong to:
- c -
- cacheP_SE_Calculation()
: SpatialSEIR::ModelContext
- calculate_eta_CPU()
: SpatialSEIR::CovariateMatrix
- calculate_eta_OCL()
: SpatialSEIR::CovariateMatrix
- calculate_fixed_eta_CPU()
: SpatialSEIR::CovariateMatrix
- calculateE_CPU()
: SpatialSEIR::ModelContext
- calculateE_givenI_CPU()
: SpatialSEIR::ModelContext
- calculateE_OCL()
: SpatialSEIR::ModelContext
- calculateEffectiveR0Components()
: SpatialSEIR::ModelContext
- calculateG()
: SpatialSEIR::ModelContext
- calculateGenericCompartment_CPU()
: SpatialSEIR::ModelContext
- calculateGenericCompartment_OCL()
: SpatialSEIR::ModelContext
- calculateI_CPU()
: SpatialSEIR::ModelContext
- calculateI_givenR_CPU()
: SpatialSEIR::ModelContext
- calculateI_OCL()
: SpatialSEIR::ModelContext
- calculateIntegratedG()
: SpatialSEIR::ModelContext
- calculateP_EI_CPU()
: SpatialSEIR::ModelContext
- calculateP_IR_CPU()
: SpatialSEIR::ModelContext
- calculateP_RS_CPU()
: SpatialSEIR::ModelContext
- calculateP_SE()
: SpatialSEIR::OCLProvider
- calculateP_SE_CPU()
: SpatialSEIR::ModelContext
- calculateP_SE_OCL()
: SpatialSEIR::ModelContext
- calculateR0Components()
: SpatialSEIR::ModelContext
- calculateR_CPU()
: SpatialSEIR::ModelContext
- calculateR_givenS_CPU()
: SpatialSEIR::ModelContext
- calculateR_OCL()
: SpatialSEIR::ModelContext
- calculateRelevantCompartments()
: SpatialSEIR::CompartmentFullConditional
, SpatialSEIR::FC_Beta
, SpatialSEIR::FC_Beta_P_RS
, SpatialSEIR::FC_E0
, SpatialSEIR::FC_E_Star
, SpatialSEIR::FC_Gamma_EI
, SpatialSEIR::FC_Gamma_IR
, SpatialSEIR::FC_I0
, SpatialSEIR::FC_I_Star_overdispersed
, SpatialSEIR::FC_Phi
, SpatialSEIR::FC_R0
, SpatialSEIR::FC_R_Star
, SpatialSEIR::FC_Rho
, SpatialSEIR::FC_S0
, SpatialSEIR::FC_S_Star
, SpatialSEIR::FullConditional
, SpatialSEIR::InitCompartmentFullConditional
, SpatialSEIR::ParameterFullConditional
- calculateRelevantCompartments_OCL()
: SpatialSEIR::CompartmentFullConditional
, SpatialSEIR::FC_Beta
, SpatialSEIR::FC_Beta_P_RS
, SpatialSEIR::FC_E0
, SpatialSEIR::FC_E_Star
, SpatialSEIR::FC_Gamma_EI
, SpatialSEIR::FC_Gamma_IR
, SpatialSEIR::FC_I0
, SpatialSEIR::FC_I_Star_overdispersed
, SpatialSEIR::FC_Phi
, SpatialSEIR::FC_R0
, SpatialSEIR::FC_R_Star
, SpatialSEIR::FC_Rho
, SpatialSEIR::FC_S0
, SpatialSEIR::FC_S_Star
, SpatialSEIR::FullConditional
, SpatialSEIR::InitCompartmentFullConditional
, SpatialSEIR::ParameterFullConditional
- calculateS_CPU()
: SpatialSEIR::ModelContext
- calculateS_givenE_CPU()
: SpatialSEIR::ModelContext
- calculateS_OCL()
: SpatialSEIR::ModelContext
- catIter()
: SpatialSEIR::IOProvider
- checkCompartmentBounds()
: SpatialSEIR::ModelContext
- close()
: SpatialSEIR::IOProvider
- CompartmentBinomialMetropolisSampler()
: SpatialSEIR::CompartmentBinomialMetropolisSampler
- CompartmentBinomialSliceSampler()
: SpatialSEIR::CompartmentBinomialSliceSampler
- compartmentCache
: SpatialSEIR::ModelContext
- compartmentData
: SpatialSEIR::CompartmentBinomialMetropolisSampler
, SpatialSEIR::CompartmentBinomialSliceSampler
, SpatialSEIR::CompartmentMetropolisSampler
, SpatialSEIR::CompartmentMetropolisSampler_OCL
, SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler
, SpatialSEIR::IndexedCompartmentMetropolisSampler
, SpatialSEIR::IndexedCompartmentSliceSampler
- compartmentFC
: SpatialSEIR::CompartmentBinomialMetropolisSampler
, SpatialSEIR::CompartmentBinomialSliceSampler
, SpatialSEIR::CompartmentMetropolisSampler
, SpatialSEIR::CompartmentMetropolisSampler_OCL
, SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler
, SpatialSEIR::IndexedCompartmentMetropolisSampler
, SpatialSEIR::IndexedCompartmentSliceSampler
- compartmentFrom
: SpatialSEIR::CompartmentBinomialMetropolisSampler
, SpatialSEIR::CompartmentBinomialSliceSampler
, SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler
- CompartmentMetropolisSampler()
: SpatialSEIR::CompartmentMetropolisSampler
- CompartmentMetropolisSampler_OCL()
: SpatialSEIR::CompartmentMetropolisSampler_OCL
- compartmentSamplingMode
: SpatialSEIR::modelConfiguration
- compartmentTo
: SpatialSEIR::CompartmentBinomialMetropolisSampler
, SpatialSEIR::CompartmentBinomialSliceSampler
, SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler
- config
: SpatialSEIR::ModelContext
- configureIterationTasks()
: SpatialSEIR::ModelContext
- context
: SpatialSEIR::CompartmentBinomialMetropolisSampler
, SpatialSEIR::CompartmentBinomialSliceSampler
, SpatialSEIR::CompartmentMetropolisSampler
, SpatialSEIR::CompartmentMetropolisSampler_OCL
, SpatialSEIR::FC_Beta
, SpatialSEIR::FC_Beta_P_RS
, SpatialSEIR::FC_E0
, SpatialSEIR::FC_E_Star
, SpatialSEIR::FC_Gamma_EI
, SpatialSEIR::FC_Gamma_IR
, SpatialSEIR::FC_I0
, SpatialSEIR::FC_I_Star_overdispersed
, SpatialSEIR::FC_Phi
, SpatialSEIR::FC_R0
, SpatialSEIR::FC_R_Star
, SpatialSEIR::FC_Rho
, SpatialSEIR::FC_S0
, SpatialSEIR::FC_S_Star
, SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler
, SpatialSEIR::IndexedCompartmentMetropolisSampler
, SpatialSEIR::IndexedCompartmentSliceSampler
, SpatialSEIR::IndexedInitCompartmentMetropolisSampler
, SpatialSEIR::IndexedInitCompartmentSliceSampler
, SpatialSEIR::InitCompartmentMetropolisSampler
, SpatialSEIR::InitCompartmentMetropolisSampler_OCL
, SpatialSEIR::IOProvider
, SpatialSEIR::ParameterDecorrelationSampler
, SpatialSEIR::ParameterHybridSampler
, SpatialSEIR::ParameterJointMetropolisSampler
, SpatialSEIR::ParameterJointMetropolisSampler_OCL
, SpatialSEIR::ParameterJointSliceSampler
, SpatialSEIR::ParameterSingleMetropolisSampler
, SpatialSEIR::PerformDecorrelationStep
, SpatialSEIR::PerformHybridSE_EI_UpdateStep
, SpatialSEIR::SetCompartmentSamplingIndicesTask
- createEmptyCompartment()
: SpatialSEIR::CompartmentalModelMatrix
- currentIteration
: SpatialSEIR::PerformDecorrelationStep
, SpatialSEIR::PerformHybridSE_EI_UpdateStep
- currentSampler
: SpatialSEIR::FullConditional