Here is a list of all class members with links to the classes they belong to:

- c -

• cacheP_SE_Calculation() : SpatialSEIR::ModelContext
• calculate_eta_CPU() : SpatialSEIR::CovariateMatrix
• calculate_eta_OCL() : SpatialSEIR::CovariateMatrix
• calculate_fixed_eta_CPU() : SpatialSEIR::CovariateMatrix
• calculateE_CPU() : SpatialSEIR::ModelContext
• calculateE_givenI_CPU() : SpatialSEIR::ModelContext
• calculateE_OCL() : SpatialSEIR::ModelContext
• calculateEffectiveR0Components() : SpatialSEIR::ModelContext
• calculateG() : SpatialSEIR::ModelContext
• calculateGenericCompartment_CPU() : SpatialSEIR::ModelContext
• calculateGenericCompartment_OCL() : SpatialSEIR::ModelContext
• calculateI_CPU() : SpatialSEIR::ModelContext
• calculateI_givenR_CPU() : SpatialSEIR::ModelContext
• calculateI_OCL() : SpatialSEIR::ModelContext
• calculateIntegratedG() : SpatialSEIR::ModelContext
• calculateP_EI_CPU() : SpatialSEIR::ModelContext
• calculateP_IR_CPU() : SpatialSEIR::ModelContext
• calculateP_RS_CPU() : SpatialSEIR::ModelContext
• calculateP_SE() : SpatialSEIR::OCLProvider
• calculateP_SE_CPU() : SpatialSEIR::ModelContext
• calculateP_SE_OCL() : SpatialSEIR::ModelContext
• calculateR0Components() : SpatialSEIR::ModelContext
• calculateR_CPU() : SpatialSEIR::ModelContext
• calculateR_givenS_CPU() : SpatialSEIR::ModelContext
• calculateR_OCL() : SpatialSEIR::ModelContext
• calculateRelevantCompartments() : SpatialSEIR::CompartmentFullConditional , SpatialSEIR::FC_Beta , SpatialSEIR::FC_Beta_P_RS , SpatialSEIR::FC_E0 , SpatialSEIR::FC_E_Star , SpatialSEIR::FC_Gamma_EI , SpatialSEIR::FC_Gamma_IR , SpatialSEIR::FC_I0 , SpatialSEIR::FC_I_Star_overdispersed , SpatialSEIR::FC_Phi , SpatialSEIR::FC_R0 , SpatialSEIR::FC_R_Star , SpatialSEIR::FC_Rho , SpatialSEIR::FC_S0 , SpatialSEIR::FC_S_Star , SpatialSEIR::FullConditional , SpatialSEIR::InitCompartmentFullConditional , SpatialSEIR::ParameterFullConditional
• calculateRelevantCompartments_OCL() : SpatialSEIR::CompartmentFullConditional , SpatialSEIR::FC_Beta , SpatialSEIR::FC_Beta_P_RS , SpatialSEIR::FC_E0 , SpatialSEIR::FC_E_Star , SpatialSEIR::FC_Gamma_EI , SpatialSEIR::FC_Gamma_IR , SpatialSEIR::FC_I0 , SpatialSEIR::FC_I_Star_overdispersed , SpatialSEIR::FC_Phi , SpatialSEIR::FC_R0 , SpatialSEIR::FC_R_Star , SpatialSEIR::FC_Rho , SpatialSEIR::FC_S0 , SpatialSEIR::FC_S_Star , SpatialSEIR::FullConditional , SpatialSEIR::InitCompartmentFullConditional , SpatialSEIR::ParameterFullConditional
• calculateS_CPU() : SpatialSEIR::ModelContext
• calculateS_givenE_CPU() : SpatialSEIR::ModelContext
• calculateS_OCL() : SpatialSEIR::ModelContext
• catIter() : SpatialSEIR::IOProvider
• checkCompartmentBounds() : SpatialSEIR::ModelContext
• close() : SpatialSEIR::IOProvider
• CompartmentBinomialMetropolisSampler() : SpatialSEIR::CompartmentBinomialMetropolisSampler
• CompartmentBinomialSliceSampler() : SpatialSEIR::CompartmentBinomialSliceSampler
• compartmentCache : SpatialSEIR::ModelContext
• compartmentData : SpatialSEIR::CompartmentBinomialMetropolisSampler , SpatialSEIR::CompartmentBinomialSliceSampler , SpatialSEIR::CompartmentMetropolisSampler , SpatialSEIR::CompartmentMetropolisSampler_OCL , SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler , SpatialSEIR::IndexedCompartmentMetropolisSampler , SpatialSEIR::IndexedCompartmentSliceSampler
• compartmentFC : SpatialSEIR::CompartmentBinomialMetropolisSampler , SpatialSEIR::CompartmentBinomialSliceSampler , SpatialSEIR::CompartmentMetropolisSampler , SpatialSEIR::CompartmentMetropolisSampler_OCL , SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler , SpatialSEIR::IndexedCompartmentMetropolisSampler , SpatialSEIR::IndexedCompartmentSliceSampler
• compartmentFrom : SpatialSEIR::CompartmentBinomialMetropolisSampler , SpatialSEIR::CompartmentBinomialSliceSampler , SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler
• CompartmentMetropolisSampler() : SpatialSEIR::CompartmentMetropolisSampler
• CompartmentMetropolisSampler_OCL() : SpatialSEIR::CompartmentMetropolisSampler_OCL
• compartmentSamplingMode : SpatialSEIR::modelConfiguration
• compartmentTo : SpatialSEIR::CompartmentBinomialMetropolisSampler , SpatialSEIR::CompartmentBinomialSliceSampler , SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler
• config : SpatialSEIR::ModelContext
• configureIterationTasks() : SpatialSEIR::ModelContext
• context : SpatialSEIR::CompartmentBinomialMetropolisSampler , SpatialSEIR::CompartmentBinomialSliceSampler , SpatialSEIR::CompartmentMetropolisSampler , SpatialSEIR::CompartmentMetropolisSampler_OCL , SpatialSEIR::FC_Beta , SpatialSEIR::FC_Beta_P_RS , SpatialSEIR::FC_E0 , SpatialSEIR::FC_E_Star , SpatialSEIR::FC_Gamma_EI , SpatialSEIR::FC_Gamma_IR , SpatialSEIR::FC_I0 , SpatialSEIR::FC_I_Star_overdispersed , SpatialSEIR::FC_Phi , SpatialSEIR::FC_R0 , SpatialSEIR::FC_R_Star , SpatialSEIR::FC_Rho , SpatialSEIR::FC_S0 , SpatialSEIR::FC_S_Star , SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler , SpatialSEIR::IndexedCompartmentMetropolisSampler , SpatialSEIR::IndexedCompartmentSliceSampler , SpatialSEIR::IndexedInitCompartmentMetropolisSampler , SpatialSEIR::IndexedInitCompartmentSliceSampler , SpatialSEIR::InitCompartmentMetropolisSampler , SpatialSEIR::InitCompartmentMetropolisSampler_OCL , SpatialSEIR::IOProvider , SpatialSEIR::ParameterDecorrelationSampler , SpatialSEIR::ParameterHybridSampler , SpatialSEIR::ParameterJointMetropolisSampler , SpatialSEIR::ParameterJointMetropolisSampler_OCL , SpatialSEIR::ParameterJointSliceSampler , SpatialSEIR::ParameterSingleMetropolisSampler , SpatialSEIR::PerformDecorrelationStep , SpatialSEIR::PerformHybridSE_EI_UpdateStep , SpatialSEIR::SetCompartmentSamplingIndicesTask
• createEmptyCompartment() : SpatialSEIR::CompartmentalModelMatrix
• currentIteration : SpatialSEIR::PerformDecorrelationStep , SpatialSEIR::PerformHybridSE_EI_UpdateStep
• currentSampler : SpatialSEIR::FullConditional