SpatialSEIR::FC_I0 Class Reference

#include <LSS_FC_I0.hpp>

Inheritance diagram for SpatialSEIR::FC_I0:

Public Member Functions
	FC_I0 (ModelContext *_context, CompartmentalModelMatrix *_S, CompartmentalModelMatrix *_I, CompartmentalModelMatrix *_R, CompartmentalModelMatrix *_S_star, CompartmentalModelMatrix *_E_star, CompartmentalModelMatrix *_R_star, InitData *_A0, double *_p_ir, double *_p_rs, double *_p_se, double sliceWidth)
virtual	~FC_I0 ()
virtual int	evalCPU ()
virtual int	evalOCL ()
virtual void	sample (int verbose)
virtual long double	getValue ()
virtual void	setValue (long double value)
virtual int	calculateRelevantCompartments ()
virtual int	calculateRelevantCompartments_OCL ()
Public Member Functions inherited from SpatialSEIR::InitCompartmentFullConditional
virtual	~InitCompartmentFullConditional ()
void	updateSamplingParameters (double desiredRatio, double targetWidth, double proportionChange)
int	getFullConditionalType ()
Public Member Functions inherited from SpatialSEIR::FullConditional
virtual	~FullConditional ()
double	acceptanceRatio ()
void	setSamplerType (int type)

Public Attributes
ModelContext **	context
CompartmentalModelMatrix **	S
CompartmentalModelMatrix **	I
CompartmentalModelMatrix **	R
CompartmentalModelMatrix **	S_star
CompartmentalModelMatrix **	E_star
CompartmentalModelMatrix **	R_star
InitData **	A0
double **	p_ir
double **	p_rs
double **	p_se
long double *	value
Public Attributes inherited from SpatialSEIR::FullConditional
double *	sliceWidth
std::vector< Sampler * > *	samplers
Sampler **	currentSampler
int *	samples
int *	accepted

Detailed Description

FC_I0 gives the full conditional distribution for the vector of initially infectious individuals.

Constructor & Destructor Documentation

SpatialSEIR::FC_I0::FC_I0	(	ModelContext *	_context,
		CompartmentalModelMatrix *	_S,
		CompartmentalModelMatrix *	_I,
		CompartmentalModelMatrix *	_R,
		CompartmentalModelMatrix *	_S_star,
		CompartmentalModelMatrix *	_E_star,
		CompartmentalModelMatrix *	_R_star,
		InitData *	_A0,
		double *	_p_ir,
		double *	_p_rs,
		double *	_p_se,
		double	sliceWidth
	)

SpatialSEIR::FC_I0::~FC_I0 ( )

virtual

Member Function Documentation

int SpatialSEIR::FC_I0::calculateRelevantCompartments ( )

virtual

Implements SpatialSEIR::InitCompartmentFullConditional.

int SpatialSEIR::FC_I0::calculateRelevantCompartments_OCL ( )

virtual

Implements SpatialSEIR::InitCompartmentFullConditional.

int SpatialSEIR::FC_I0::evalCPU ( )

virtual

Implements SpatialSEIR::InitCompartmentFullConditional.

int SpatialSEIR::FC_I0::evalOCL ( )

virtual

Implements SpatialSEIR::InitCompartmentFullConditional.

long double SpatialSEIR::FC_I0::getValue ( )

virtual

Implements SpatialSEIR::InitCompartmentFullConditional.

void SpatialSEIR::FC_I0::sample ( int  verbose )

virtual

Implements SpatialSEIR::InitCompartmentFullConditional.

void SpatialSEIR::FC_I0::setValue ( long double  value )

virtual

Implements SpatialSEIR::InitCompartmentFullConditional.

Member Data Documentation

InitData** SpatialSEIR::FC_I0::A0

ModelContext** SpatialSEIR::FC_I0::context

CompartmentalModelMatrix** SpatialSEIR::FC_I0::E_star

CompartmentalModelMatrix** SpatialSEIR::FC_I0::I

double** SpatialSEIR::FC_I0::p_ir

double** SpatialSEIR::FC_I0::p_rs

double** SpatialSEIR::FC_I0::p_se

CompartmentalModelMatrix** SpatialSEIR::FC_I0::R

CompartmentalModelMatrix** SpatialSEIR::FC_I0::R_star

CompartmentalModelMatrix** SpatialSEIR::FC_I0::S

CompartmentalModelMatrix** SpatialSEIR::FC_I0::S_star

long double* SpatialSEIR::FC_I0::value

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The documentation for this class was generated from the following files:

• libSpatialSEIR/include/FullConditionals/LSS_FC_I0.hpp
• libSpatialSEIR/src/FullConditionals/FC_I0.cpp