SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler Class Reference

#include <LSS_Samplers.hpp>

Inheritance diagram for SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler:

Public Member Functions
	IndexedCompartmentBinomialMetropolisSampler (ModelContext *context, CompartmentFullConditional *compartmentFC, int *compartmentData, int *compartmentFrom, int *compartmentTo, double *probabilityVector, int probabilityVectorLen)
void	drawSample ()
int	getSamplerType ()
void	genProposal ()
	~IndexedCompartmentBinomialMetropolisSampler ()
Public Member Functions inherited from SpatialSEIR::Sampler
virtual	~Sampler ()

Public Attributes
ModelContext **	context
CompartmentFullConditional **	compartmentFC
int **	indexLength
int **	indexList
int **	compartmentData
int **	compartmentFrom
int **	compartmentTo
double **	probabilityVector
int *	probabilityVectorLen

Detailed Description

The IndexedCompartmentBinomialMetropolisSampler class is child of the Sampler class which draws samples from the posterior distribution of the various transition compartments using a chain binomial proposal based on the parameters, and uses the ModelContext index to update only a portion of the compartment each iteration.

Constructor & Destructor Documentation

SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::IndexedCompartmentBinomialMetropolisSampler	(	ModelContext *	context,
		CompartmentFullConditional *	compartmentFC,
		int *	compartmentData,
		int *	compartmentFrom,
		int *	compartmentTo,
		double *	probabilityVector,
		int	probabilityVectorLen
	)

SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::~IndexedCompartmentBinomialMetropolisSampler

(

)

Member Function Documentation

void SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::drawSample ( )

virtual

Implements SpatialSEIR::Sampler.

void SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::genProposal

(

)

int SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::getSamplerType ( )

virtual

Implements SpatialSEIR::Sampler.

Member Data Documentation

int** SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::compartmentData

CompartmentFullConditional** SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::compartmentFC

int** SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::compartmentFrom

int** SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::compartmentTo

ModelContext** SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::context

int** SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::indexLength

int** SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::indexList

double** SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::probabilityVector

int* SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler::probabilityVectorLen

---

The documentation for this class was generated from the following file:

• libSpatialSEIR/include/LSS_Samplers.hpp