SpatialSEIR::FC_I_Star_overdispersed Class Reference

#include <LSS_FC_I_star_overdispersion.hpp>

Inheritance diagram for SpatialSEIR::FC_I_Star_overdispersed:

Public Member Functions
	FC_I_Star_overdispersed (ModelContext *_context, int *_Y, CompartmentalModelMatrix *_I_star, CompartmentalModelMatrix *_I, CompartmentalModelMatrix *_E, CompartmentalModelMatrix *_R_star, double *_p_ei, double *_p_ir, double *_phi, double _steadyStateConstraintPrecision, double _sliceWidth)
virtual int	evalCPU ()
virtual int	evalCPU (int i, int j)
virtual int	evalOCL ()
virtual void	sample (int verbose)
virtual long double	getValue ()
virtual void	setValue (long double val)
virtual int	calculateRelevantCompartments ()
virtual int	calculateRelevantCompartments (int i, int j)
virtual int	calculateRelevantCompartments_OCL ()
virtual	~FC_I_Star_overdispersed ()
Public Member Functions inherited from SpatialSEIR::CompartmentFullConditional
virtual	~CompartmentFullConditional ()
void	updateSamplingParameters (double desiredRatio, double targetWidth, double proportionChange)
int	getFullConditionalType ()
Public Member Functions inherited from SpatialSEIR::FullConditional
virtual	~FullConditional ()
double	acceptanceRatio ()
void	setSamplerType (int type)

Public Attributes
ModelContext **	context
int **	Y
CompartmentalModelMatrix **	I_star
CompartmentalModelMatrix **	I
CompartmentalModelMatrix **	E
CompartmentalModelMatrix **	R_star
InitData **	A0
double **	p_ei
double **	p_ir
double **	phi
long double *	value
double *	steadyStateConstraintPrecision
Public Attributes inherited from SpatialSEIR::CompartmentFullConditional
double *	steadyStateConstraintPrecision
Public Attributes inherited from SpatialSEIR::FullConditional
double *	sliceWidth
std::vector< Sampler * > *	samplers
Sampler **	currentSampler
int *	samples
int *	accepted

Detailed Description

FC_I_Star_overdispersed gives the overdispersion data model for I_star.

Constructor & Destructor Documentation

SpatialSEIR::FC_I_Star_overdispersed::FC_I_Star_overdispersed	(	ModelContext *	_context,
		int *	_Y,
		CompartmentalModelMatrix *	_I_star,
		CompartmentalModelMatrix *	_I,
		CompartmentalModelMatrix *	_E,
		CompartmentalModelMatrix *	_R_star,
		double *	_p_ei,
		double *	_p_ir,
		double *	_phi,
		double	_steadyStateConstraintPrecision,
		double	_sliceWidth
	)

virtual SpatialSEIR::FC_I_Star_overdispersed::~FC_I_Star_overdispersed ( )

virtual

Member Function Documentation

virtual int SpatialSEIR::FC_I_Star_overdispersed::calculateRelevantCompartments ( )

virtual

Implements SpatialSEIR::CompartmentFullConditional.

virtual int SpatialSEIR::FC_I_Star_overdispersed::calculateRelevantCompartments ( int  i, int  j  )

virtual

Implements SpatialSEIR::CompartmentFullConditional.

virtual int SpatialSEIR::FC_I_Star_overdispersed::calculateRelevantCompartments_OCL ( )

virtual

Implements SpatialSEIR::CompartmentFullConditional.

virtual int SpatialSEIR::FC_I_Star_overdispersed::evalCPU ( )

virtual

Implements SpatialSEIR::CompartmentFullConditional.

virtual int SpatialSEIR::FC_I_Star_overdispersed::evalCPU ( int  i, int  j  )

virtual

Implements SpatialSEIR::CompartmentFullConditional.

virtual int SpatialSEIR::FC_I_Star_overdispersed::evalOCL ( )

virtual

Implements SpatialSEIR::CompartmentFullConditional.

virtual long double SpatialSEIR::FC_I_Star_overdispersed::getValue ( )

virtual

Implements SpatialSEIR::CompartmentFullConditional.

virtual void SpatialSEIR::FC_I_Star_overdispersed::sample ( int  verbose )

virtual

Implements SpatialSEIR::CompartmentFullConditional.

virtual void SpatialSEIR::FC_I_Star_overdispersed::setValue ( long double  val )

virtual

Implements SpatialSEIR::CompartmentFullConditional.

Member Data Documentation

InitData** SpatialSEIR::FC_I_Star_overdispersed::A0

ModelContext** SpatialSEIR::FC_I_Star_overdispersed::context

CompartmentalModelMatrix** SpatialSEIR::FC_I_Star_overdispersed::E

CompartmentalModelMatrix** SpatialSEIR::FC_I_Star_overdispersed::I

CompartmentalModelMatrix** SpatialSEIR::FC_I_Star_overdispersed::I_star

double** SpatialSEIR::FC_I_Star_overdispersed::p_ei

double** SpatialSEIR::FC_I_Star_overdispersed::p_ir

double** SpatialSEIR::FC_I_Star_overdispersed::phi

CompartmentalModelMatrix** SpatialSEIR::FC_I_Star_overdispersed::R_star

double* SpatialSEIR::FC_I_Star_overdispersed::steadyStateConstraintPrecision

long double* SpatialSEIR::FC_I_Star_overdispersed::value

int** SpatialSEIR::FC_I_Star_overdispersed::Y

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The documentation for this class was generated from the following file:

• libSpatialSEIR/include/FullConditionals/DataModels/Overdispersion/LSS_FC_I_star_overdispersion.hpp