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libspatialSEIR
0.1
Bayesian Spatial SEIR Modeling
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#include <LSS_IterationTasks.hpp>
Public Member Functions | |
| SetCompartmentSamplingIndicesTask (ModelContext *context) | |
| ~SetCompartmentSamplingIndicesTask () | |
| void | executeTask () |
| int | getTaskType () |
Public Member Functions inherited from SpatialSEIR::IterationTask | |
| virtual | ~IterationTask () |
Public Attributes | |
| ModelContext ** | context |
| int ** | index |
| int ** | indexLength |
Several of the compartment sampling classes rely on a list of indices managed by model context to jointly update the same space-time locations for each of the compartments in order to reduce sampler autocorrelation. This task updates the list of indices after each MCMC sample.
| SpatialSEIR::SetCompartmentSamplingIndicesTask::SetCompartmentSamplingIndicesTask | ( | ModelContext * | context | ) |
| SpatialSEIR::SetCompartmentSamplingIndicesTask::~SetCompartmentSamplingIndicesTask | ( | ) |
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virtual |
Implements SpatialSEIR::IterationTask.
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virtual |
Implements SpatialSEIR::IterationTask.
| ModelContext** SpatialSEIR::SetCompartmentSamplingIndicesTask::context |
| int** SpatialSEIR::SetCompartmentSamplingIndicesTask::index |
| int** SpatialSEIR::SetCompartmentSamplingIndicesTask::indexLength |
1.8.6