SpatialSEIR::FC_Rho Class Reference

#include <LSS_FC_Rho.hpp>

Inheritance diagram for SpatialSEIR::FC_Rho:

Public Member Functions
	FC_Rho (ModelContext *_context, CompartmentalModelMatrix *_E_star, CompartmentalModelMatrix *_S, InitData *_A0, CovariateMatrix *_X, double *_p_se, double *_beta, double *_rho, double sliceWidth)
	~FC_Rho ()
virtual double	evalPrior ()
virtual int	evalCPU ()
virtual int	evalOCL ()
virtual void	sample (int verbose)
virtual long double	getValue ()
virtual void	setValue (long double val)
virtual int	calculateRelevantCompartments ()
virtual int	calculateRelevantCompartments_OCL ()
Public Member Functions inherited from SpatialSEIR::ParameterFullConditional
virtual	~ParameterFullConditional ()
virtual double	acceptanceRatio (int i)
void	updateSamplingParameters (double desiredRatio, double targetWidth, double proportionChange)
int	getFullConditionalType ()
Public Member Functions inherited from SpatialSEIR::FullConditional
virtual	~FullConditional ()
double	acceptanceRatio ()
void	setSamplerType (int type)

Public Attributes
ModelContext **	context
CompartmentalModelMatrix **	E_star
CompartmentalModelMatrix **	S
InitData **	A0
CovariateMatrix **	X
double **	p_se
double **	beta
double **	rho
long double *	value
Public Attributes inherited from SpatialSEIR::ParameterFullConditional
int *	varLen
Public Attributes inherited from SpatialSEIR::FullConditional
double *	sliceWidth
std::vector< Sampler * > *	samplers
Sampler **	currentSampler
int *	samples
int *	accepted

Detailed Description

FC_Rho gives the full conditional distribution of rho, the scalar spatial dependence parameter.

Constructor & Destructor Documentation

SpatialSEIR::FC_Rho::FC_Rho	(	ModelContext *	_context,
		CompartmentalModelMatrix *	_E_star,
		CompartmentalModelMatrix *	_S,
		InitData *	_A0,
		CovariateMatrix *	_X,
		double *	_p_se,
		double *	_beta,
		double *	_rho,
		double	sliceWidth
	)

SpatialSEIR::FC_Rho::~FC_Rho

(

)

Member Function Documentation

int SpatialSEIR::FC_Rho::calculateRelevantCompartments ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

int SpatialSEIR::FC_Rho::calculateRelevantCompartments_OCL ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

int SpatialSEIR::FC_Rho::evalCPU ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

int SpatialSEIR::FC_Rho::evalOCL ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

double SpatialSEIR::FC_Rho::evalPrior ( )

virtual

long double SpatialSEIR::FC_Rho::getValue ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

void SpatialSEIR::FC_Rho::sample ( int  verbose )

virtual

Implements SpatialSEIR::ParameterFullConditional.

void SpatialSEIR::FC_Rho::setValue ( long double  val )

virtual

Implements SpatialSEIR::ParameterFullConditional.

Member Data Documentation

InitData** SpatialSEIR::FC_Rho::A0

double** SpatialSEIR::FC_Rho::beta

ModelContext** SpatialSEIR::FC_Rho::context

CompartmentalModelMatrix** SpatialSEIR::FC_Rho::E_star

double** SpatialSEIR::FC_Rho::p_se

double** SpatialSEIR::FC_Rho::rho

CompartmentalModelMatrix** SpatialSEIR::FC_Rho::S

long double* SpatialSEIR::FC_Rho::value

CovariateMatrix** SpatialSEIR::FC_Rho::X

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The documentation for this class was generated from the following files:

• libSpatialSEIR/include/FullConditionals/LSS_FC_Rho.hpp
• libSpatialSEIR/src/FullConditionals/FC_Rho.cpp