#include <LSS_FC_R_star.hpp>

Inheritance diagram for SpatialSEIR::FC_R_Star:

Public Member Functions
	FC_R_Star (ModelContext _context, CompartmentalModelMatrix _R_star, CompartmentalModelMatrix _R, CompartmentalModelMatrix _I, CompartmentalModelMatrix _S_star, CompartmentalModelMatrix _E_star, CompartmentalModelMatrix _I_star, CompartmentalModelMatrix _S, InitData _A0, double _p_rs, double _p_ir, double _p_se, double _steadyStateConstraintPrecision, double sliceWidth)

	~FC_R_Star ()

virtual int	evalCPU ()

virtual int	evalCPU (int i, int j)

virtual int	evalOCL ()

virtual void	sample (int verbose)

virtual long double	getValue ()

virtual void	setValue (long double val)

virtual int	calculateRelevantCompartments ()

virtual int	calculateRelevantCompartments (int i, int j)

virtual int	calculateRelevantCompartments_OCL ()

Public Member Functions inherited from SpatialSEIR::CompartmentFullConditional
virtual	~CompartmentFullConditional ()

void	updateSamplingParameters (double desiredRatio, double targetWidth, double proportionChange)

int	getFullConditionalType ()

Public Member Functions inherited from SpatialSEIR::FullConditional
virtual	~FullConditional ()

double	acceptanceRatio ()

void	setSamplerType (int type)

Public Attributes
ModelContext **	context

CompartmentalModelMatrix **	R_star

CompartmentalModelMatrix **	R

CompartmentalModelMatrix **	I

CompartmentalModelMatrix **	S_star

CompartmentalModelMatrix **	E_star

CompartmentalModelMatrix **	I_star

CompartmentalModelMatrix **	S

InitData **	A0

double **	p_rs

double **	p_ir

double **	p_se

long double *	value

double *	steadyStateConstraintPrecision

Public Attributes inherited from SpatialSEIR::CompartmentFullConditional
double *	steadyStateConstraintPrecision

Public Attributes inherited from SpatialSEIR::FullConditional
double *	sliceWidth

std::vector< Sampler * > *	samplers

Sampler **	currentSampler

int *	samples

int *	accepted

Detailed Description

FC_R_Star gives the full conditional distribution of R_star, the transition matrix capturing individuals moving from the infectious category to the recovered/removed category.

Constructor & Destructor Documentation

SpatialSEIR::FC_R_Star::FC_R_Star	(	ModelContext *	_context,
		CompartmentalModelMatrix *	_R_star,
		CompartmentalModelMatrix *	_R,
		CompartmentalModelMatrix *	_I,
		CompartmentalModelMatrix *	_S_star,
		CompartmentalModelMatrix *	_E_star,
		CompartmentalModelMatrix *	_I_star,
		CompartmentalModelMatrix *	_S,
		InitData *	_A0,
		double *	_p_rs,
		double *	_p_ir,
		double *	_p_se,
		double	_steadyStateConstraintPrecision,
		double	sliceWidth
	)