SpatialSEIR::FC_Phi Class Reference

#include <LSS_FC_Phi.hpp>

Inheritance diagram for SpatialSEIR::FC_Phi:

Public Member Functions
	FC_Phi (ModelContext *_context, CompartmentalModelMatrix *_I_star, double *_phi, double _priorAlpha, double _priorBeta, int *_Y, double sliceWidth)
	~FC_Phi ()
virtual double	evalPrior ()
virtual int	evalCPU ()
virtual int	evalOCL ()
virtual void	sample (int verbose)
virtual long double	getValue ()
virtual void	setValue (long double val)
virtual int	calculateRelevantCompartments ()
virtual int	calculateRelevantCompartments_OCL ()
Public Member Functions inherited from SpatialSEIR::ParameterFullConditional
virtual	~ParameterFullConditional ()
virtual double	acceptanceRatio (int i)
void	updateSamplingParameters (double desiredRatio, double targetWidth, double proportionChange)
int	getFullConditionalType ()
Public Member Functions inherited from SpatialSEIR::FullConditional
virtual	~FullConditional ()
double	acceptanceRatio ()
void	setSamplerType (int type)

Public Attributes
ModelContext **	context
CompartmentalModelMatrix **	I_star
double **	phi
double *	priorAlpha
double *	priorBeta
int **	Y
long double *	value
Public Attributes inherited from SpatialSEIR::ParameterFullConditional
int *	varLen
Public Attributes inherited from SpatialSEIR::FullConditional
double *	sliceWidth
std::vector< Sampler * > *	samplers
Sampler **	currentSampler
int *	samples
int *	accepted

Detailed Description

FC_Phi gives the full conditional distribution of rho, the scalar spatial dependence parameter.

Constructor & Destructor Documentation

SpatialSEIR::FC_Phi::FC_Phi	(	ModelContext *	_context,
		CompartmentalModelMatrix *	_I_star,
		double *	_phi,
		double	_priorAlpha,
		double	_priorBeta,
		int *	_Y,
		double	sliceWidth
	)

SpatialSEIR::FC_Phi::~FC_Phi

(

)

Member Function Documentation

virtual int SpatialSEIR::FC_Phi::calculateRelevantCompartments ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

virtual int SpatialSEIR::FC_Phi::calculateRelevantCompartments_OCL ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

virtual int SpatialSEIR::FC_Phi::evalCPU ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

virtual int SpatialSEIR::FC_Phi::evalOCL ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

virtual double SpatialSEIR::FC_Phi::evalPrior ( )

virtual

virtual long double SpatialSEIR::FC_Phi::getValue ( )

virtual

Implements SpatialSEIR::ParameterFullConditional.

virtual void SpatialSEIR::FC_Phi::sample ( int  verbose )

virtual

Implements SpatialSEIR::ParameterFullConditional.

virtual void SpatialSEIR::FC_Phi::setValue ( long double  val )

virtual

Implements SpatialSEIR::ParameterFullConditional.

Member Data Documentation

ModelContext** SpatialSEIR::FC_Phi::context

CompartmentalModelMatrix** SpatialSEIR::FC_Phi::I_star

double** SpatialSEIR::FC_Phi::phi

double* SpatialSEIR::FC_Phi::priorAlpha

double* SpatialSEIR::FC_Phi::priorBeta

long double* SpatialSEIR::FC_Phi::value

int** SpatialSEIR::FC_Phi::Y

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The documentation for this class was generated from the following file:

• libSpatialSEIR/include/FullConditionals/DataModels/Overdispersion/LSS_FC_Phi.hpp