libspatialSEIR  0.1
Bayesian Spatial SEIR Modeling
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Classes | Namespaces | Macros
LSS_Samplers.hpp File Reference
#include <cstring>
#include <vector>

Go to the source code of this file.

Classes

class  SpatialSEIR::Sampler
 
class  SpatialSEIR::ParameterNullSampler
 
class  SpatialSEIR::ParameterHybridSampler
 
class  SpatialSEIR::CompartmentMetropolisSampler
 
class  SpatialSEIR::CompartmentMetropolisSampler_OCL
 
class  SpatialSEIR::IndexedCompartmentMetropolisSampler
 
class  SpatialSEIR::IndexedCompartmentSliceSampler
 
class  SpatialSEIR::CompartmentBinomialMetropolisSampler
 
class  SpatialSEIR::IndexedCompartmentBinomialMetropolisSampler
 
class  SpatialSEIR::CompartmentBinomialSliceSampler
 
class  SpatialSEIR::InitCompartmentMetropolisSampler
 
class  SpatialSEIR::InitCompartmentMetropolisSampler_OCL
 
class  SpatialSEIR::IndexedInitCompartmentMetropolisSampler
 
class  SpatialSEIR::IndexedInitCompartmentSliceSampler
 
class  SpatialSEIR::ParameterSingleMetropolisSampler
 
class  SpatialSEIR::ParameterJointMetropolisSampler
 
class  SpatialSEIR::ParameterJointMetropolisSampler_OCL
 
class  SpatialSEIR::ParameterJointSliceSampler
 
class  SpatialSEIR::ParameterDecorrelationSampler
 

Namespaces

 SpatialSEIR
 

Macros

#define LSS_SAMPLERS_INC
 
#define COMPARTMENT_METROPOLIS_SAMPLER   1
 
#define COMPARTMENT_IDX_METROPOLIS_SAMPLER   2
 
#define COMPARTMENT_IDX_SLICE_SAMPLER   3
 
#define COMPARTMENT_BINOM_PROPOSAL_METROPOLIS_SAMPLER   14
 
#define COMPARTMENT_BINOM_PROPOSAL_SLICE_SAMPLER   15
 
#define COMPARTMENT_BINOM_IDX_METROPOLIS_SAMPLER   16
 
#define INITCOMPARTMENT_METROPOLIS_SAMPLER   4
 
#define INITCOMPARTMENT_IDX_METROPOLIS_SAMPLER   5
 
#define INITCOMPARTMENT_IDX_SLICE_SAMPLER   6
 
#define PARAMETER_SINGLE_METROPOLIS_SAMPLER   7
 
#define PARAMETER_JOINT_METROPOLIS_SAMPLER   8
 
#define PARAMETER_JOINT_SLICE_SAMPLER   9
 
#define PARAMETER_DECORR_SAMPLER   10
 
#define COMPARTMENT_METROPOLIS_SAMPLER_OCL   11
 
#define INITCOMPARTMENT_METROPOLIS_SAMPLER_OCL   12
 
#define PARAMETER_JOINT_METROPOLIS_SAMPLER_OCL   13
 
#define PARAMETER_NULL_SAMPLER   17
 
#define HYBRID_SAMPLER_BETA_P_EI   18
 

Macro Definition Documentation

#define COMPARTMENT_BINOM_IDX_METROPOLIS_SAMPLER   16
#define COMPARTMENT_BINOM_PROPOSAL_METROPOLIS_SAMPLER   14
#define COMPARTMENT_BINOM_PROPOSAL_SLICE_SAMPLER   15
#define COMPARTMENT_IDX_METROPOLIS_SAMPLER   2
#define COMPARTMENT_IDX_SLICE_SAMPLER   3
#define COMPARTMENT_METROPOLIS_SAMPLER   1
#define COMPARTMENT_METROPOLIS_SAMPLER_OCL   11
#define HYBRID_SAMPLER_BETA_P_EI   18
#define INITCOMPARTMENT_IDX_METROPOLIS_SAMPLER   5
#define INITCOMPARTMENT_IDX_SLICE_SAMPLER   6
#define INITCOMPARTMENT_METROPOLIS_SAMPLER   4
#define INITCOMPARTMENT_METROPOLIS_SAMPLER_OCL   12
#define LSS_SAMPLERS_INC
#define PARAMETER_DECORR_SAMPLER   10
#define PARAMETER_JOINT_METROPOLIS_SAMPLER   8
#define PARAMETER_JOINT_METROPOLIS_SAMPLER_OCL   13
#define PARAMETER_JOINT_SLICE_SAMPLER   9
#define PARAMETER_NULL_SAMPLER   17
#define PARAMETER_SINGLE_METROPOLIS_SAMPLER   7